Package: CureAuxSP 0.0.1

CureAuxSP: Mixture Cure Models with Auxiliary Subgroup Survival Probabilities

Estimate mixture cure models with subgroup survival probabilities as auxiliary information. A reference of the underlying methods is Jie Ding, Jialiang Li and Xiaoguang Wang (2024) <doi:10.1093/jrsssc/qlad106>.

Authors:Jie Ding [aut, cre], Jialiang Li [aut], Mengxiu Zhang [aut], Xiaoguang Wang [aut]

CureAuxSP_0.0.1.tar.gz
CureAuxSP_0.0.1.zip(r-4.5)CureAuxSP_0.0.1.zip(r-4.4)CureAuxSP_0.0.1.zip(r-4.3)

CureAuxSP_0.0.1.tar.gz(r-4.5-noble)CureAuxSP_0.0.1.tar.gz(r-4.4-noble)
CureAuxSP_0.0.1.tgz(r-4.4-emscripten)CureAuxSP_0.0.1.tgz(r-4.3-emscripten)
CureAuxSP.pdf |CureAuxSP.html✨
CureAuxSP/json (API)

# Install 'CureAuxSP' in R:

install.packages('CureAuxSP', repos = c('https://biostat-jieding.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/biostat-jieding/cureauxsp/issues

On CRAN:

4.20 score 4 stars 1 scripts 400 downloads 4 exports 109 dependencies

Last updated 6 months agofrom:fa0200472f. Checks:OK: 1 NOTE: 4. Indexed: yes.

Target	Result	Date
Doc / Vignettes	OK	Nov 04 2024
R-4.5-win	NOTE	Nov 04 2024
R-4.5-linux	NOTE	Nov 04 2024
R-4.4-win	NOTE	Nov 04 2024
R-4.3-win	NOTE	Oct 05 2024

Exports:Print.SMC.AuxSP Probs.Sub sdata.SMC SMC.AuxSP

Dependencies:abind AnnotationDbi askpass Biobase BiocFileCache BiocGenerics biomaRt Biostrings bit bit64 blob cachem cli clipr colorspace cpp11 crayon curl data.table DBI dbplyr DelayedArray digest downloader dplyr evaluate fansi farver fastmap filelock generics GenomeInfoDb GenomeInfoDbData GenomicRanges ggplot2 glue gtable highr hms httr httr2 IRanges isoband jsonlite KEGGREST knitr labeling lars lattice lifecycle magrittr MASS Matrix MatrixGenerics matrixStats memoise mgcv mime munsell mvtnorm nlme openssl pillar pkgconfig plogr plyr png prettyunits progress purrr R.methodsS3 R.oo R.utils R6 rappdirs RColorBrewer Rcpp readr rlang RSQLite rvest S4Arrays S4Vectors scales selectr SparseArray stringi stringr SummarizedExperiment survival sys TCGAbiolinks TCGAbiolinksGUI.data tibble tidyr tidyselect tzdb UCSC.utils utf8 vctrs viridisLite vroom withr xfun XML xml2 XVector yaml zlibbioc

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
CureAuxSP: Mixture Cure Models with Auxiliary Subgroup Survival Probabilities.	CureAuxSP
Print SMC.AuxSP object returned by our main function SMC.AuxSP()	Print.SMC.AuxSP
Calculate subgroup survival probabilities	Probs.Sub
Generate simulated dataset from a well-designed PH mixture cure model	sdata.SMC
Semi-parametric mixture cure model with auxiliary subgroup survival information	SMC.AuxSP